- D. Catanzaro, M. Frohn, O. Gascuel, and R. Pesenti. A Tutorial on the Balanced Minimum Evolution. European Journal of Operational Research, 300(1): 1-19, 2022. Invited article.
- D. Catanzaro, R. Pesenti, and L. Wolsey. On the Balanced Minimum Evolution Polytope. Discrete Optimization, 36: 100570, 2020.
- D. Catanzaro, M. Frohn, and R. Pesenti. An information theory perspective on the Balanced Minimum Evolution Problem. Operations Research Letters, 48(3): 362-367, 2020.
- D. Catanzaro and R. Pesenti. Enumerating Vertices of the Balanced Minimum Evolution Polytope. Computers and Operations Research, 109, 209-217, 2019.
- D. Catanzaro, S. Chaplick, S. Felsner, B. V. Halldórsson, M. M. Halldórsson, T. Hixon, and J. Stacho. Max point-tolerance graphs. Discrete Applied Mathematics, 216(1): 84-97, 2017.
- D. Catanzaro, S. E. Shackney, A. A. Schäffer, and R. Schwartz. Classifying the progression of Ductal Carcinoma from single-cell sampled data via integer linear programming: A case study. IEEE/ACM Transactions in Computational Biology and Bioinformatics, 13(4):643–655, 2016.
- D. Catanzaro, R. Aringhieri, M. Di Summa, and R. Pesenti. A branch-price-and-cut algorithm for the minimum evolution problem. European Journal of Operational Research, 244(3), 753–765, 2015.
- D. Catanzaro, M. Labbé, and L. E. N. Gouveia. Improved integer linear programming formulations for the job sequencing and tool switching problem. European Journal of Operational Research, 244(3), 766–777, 2015.
- D. Catanzaro, M. Labbé, R. Pesenti, and J. J. Salazar-González. The balanced minimum evolution problem. INFORMS Journal on Computing, 24(2), 276-294, 2012.
- D. Catanzaro, A. Godi, and M. Labbé. A class representative model for pure parsimony haplotyping. INFORMS Journal on Computing 22(2), 195–209, 2010.